Publications 📖

Published Datasets

2024

Abdool-Ghany AA, Gabriele-Solo H, Manning Sr. In review. Deep Sequencing Results for Samples of Stranded Sargassum. International Journal of Microbiology 

Ashworth MP, Goessling JW, Lam DW, Manning SR, Lopez-Garcia M. In review. Adaptive evolution and early diversification of photonic nanomaterials in marine diatoms. Scientific Reports

Gámez TE, Manning SR. In review. Factors impacting the stability of freshwater phytoplankton communities in the Anthropocene. Harmful Algae

Saad MG, Shafik H, Nobles D, Manning SR. In review. Novel application of droplet-based microfluidic technology to screen the growth of filamentous cyanobacteria. J Appl Phycol

Ashworth MP, Theriot EC, Manning SR. In press. New benthic araphid pennate diatom genus Florellopsis (gen. nov.) and implications for the classification of genera in the orders Cyclophorales and Protoraphidales (Fragilariophyceae). Nova Hedewigia

Rakowski CJ, Leibold MA, Manning SR. 2024. Sunfish as zooplankton control agents to improve yields of wastewater-cultivated algae. J Appl Phycol. https://doi.org/10.1007/s10811-024-03281-3

Ashworth MP, Goessling JW, Lam DW, Manning SR, Lopez-Garcia M. 2024. Natural slab photonic crystals and where to find them among the girdle bands of diatoms. bioRxiv 2024.03.08.584047, https://doi.org/10.1101/2024.03.08.584047

Perri KA, Bellinger BJ, Ashworth MP, Manning SR. 2024. Environmental factors impacting the development of toxic cyanobacterial proliferations in a central Texas reservoir. Toxins. https://doi.org/10.3390/toxins16020091

2023

Rakowski CJ, Leibold MA, Manning SR. 2023. Sunfish as zooplankton control agents to improve yields of wastewater-cultivated algae. bioRxiv 2023.12.22.573129; https://doi.org/10.1101/ 2023.12.22.573129

Franco A, Ashworth MP, Du Preez D, Campbell E, Maggioni R, Manning SR, Odebrecht C. 2023. Surf-diatoms from sandy beaches on the Eastern Coast of South America (Brazil): the identification of Anaulus Ehrenberg and Asterionellopsis Round. Botanica Marinus. https://doi.org/10.1515/bot-2022-0067

Frederickson A, Richter A, Perri KP, Manning SR. 2023. First confirmed case of canine mortality due to dihydroanatoxin-a in central Texas. Toxins 15(8), 485. https://doi.org/10.3390/toxins15080485 

Ashworth MP, Sims P, Theriot EC, Manning SR. 2023.  Molecular and morphological analysis of Biddulphia sensu lato: a new diagnosis of Biddulphia, with a description of the new genera Biddulphiella and Neobrightwellia. Marine Micropaleontology 178 (102186). https://doi.org/10.1016/j.marmicro.2022.102186

Wisecaver JH, Auber RP, Pendleton AL, Watervoort NF, Fallon TR, Riedling OL, Moore BS, Manning SR, Driscoll WW. 2023. Extreme genome diversity and cryptic speciation in a harmful algal bloom-forming eukaryote. Current Biology. https://doi.org/10.1016/j.cub.2023.05.003

Gámez TE, Groeger AW, Manning SR. 2023. Dynamic phytoplankton community structure in a subtropical reservoir during an extended drought, Central Texas, USA. Aquatic Sciences 85 (1), 1-14. https://doi.org/10.1007/s00027-022-00903-1

Wisecaver JH, Auber RP, Pendleton AL, Watervoort NF, Fallon TR, Riedling OL, Moore BS, Manning SR, Driscoll WW. 2022. Extreme genome diversity and cryptic speciation in a harmful algal bloom forming eukaryote. bioRxiv 10.25.513657, https://doi.org/10.1101/2022.10.25.513657 

2022

*Manning SR. Microalgal lipids: biochemistry and biotechnology. 2022. Current Opinion in Biotechnology 73 (1), 1-7. https://doi.org/10.1016/j.copbio.2021.10.018 *invited manuscript

Ashworth MP, Majewska R, Frankovich T, Sullivan M, Bosak S, Filek K, Van De Vijver B, Arendt M, Schwenter J, Nel R, Robinson NJ, Gary MP, Theriot EC, Stacy N, Lam D, Perrault JR, Manire CA, Manning SR. 2022. Culturing putatively obligate epizoic diatoms: insights for the evolution and ecology of diatoms and their host. Scientific Reports 12, 15116. https://doi.org/10.1038/s41598-022-19064-0

2021

Rakowski CJ, Farrior CE, Manning SR, Leibold MA. 2021. Predator complementarity dampens variability of phytoplankton biomass in a diversity-stability trophic cascade. Ecology 102 (12), e03534. https://doi.org/10.1002/ecy.3534

*Manning SR, Gol RD. 2021. Developments in algal processing, In: Seaweed and microalgae as alternative sources of protein (Ed. X Lei), Burleigh Dodds Science Publishing, Cambridge, U.K. https://doi.org/10.19103/AS.2021.0091.09 *invited chapter

Saadaoui I, Rasheed R, Aguilar A, Cherif M, Al Jabri H, Sayadi S, and Manning SR. 2021. Microalgal-based feed: promising alternative feedstocks for livestock and poultry production. Journal of Animal Science and Biotechnology, 12 (1), pp.1-15. https://doi.org/10.1186/s40104-021-00593-z

Perri KA, Manning SR, Fowler NJ, Watson SB, Boyer G. 2021. Application of pulse-amplitude modulated (PAM) fluorometry for the determination of nutrient limitation in the bloom-forming cyanobacterium, Microcystis aeruginosa (Kützing). Photochemistry & Photobiology, B: Biology 219, 112186. https://doi.org/10.1016/j.jphotobiol.2021.112186

*Manning SR, Perri KA, Blackwell K. 2021. Bioactive polysaccharides from microalgae, In: Polysaccharides of Microbial Origin. (Eds., JM Oliviera, H Radhouani, and RL Reis), Springer, Cham. https://doi.org/10.1007/978-3-030-35734-4_37-1 *invited chapter

Sun T, Wang K, Wyman B, Sudibyo H, Liu G, Beal C, Manning SR, Johnson Z, Tester J, Aydemir T, Lei X. 2021. Supplemental dietary full-fatted and defatted Desmodesmus sp. exerted similar effects on growth performance, gut health, and excreta hydrothermal liquefaction of broiler chicks. Algal Research 54, 1102205. https://doi.org/10.1016/j.algal.2021.102205

Majewska R, Ashworth MP, Bosak S, Goosen WE, Nolte C, Filek K, Van de Vijver B, Taylor JC, Manning SR, Nel R. 2021. On sea turtle-associated Craspedostauros (Bacillariophyta), with a description of three novel species. J Phycol 57, 199-218. https://doi.org/10.1111/jpy.13086

2020

Manning SR, Perri KA, Bellinger B. 2020. Bloom Announcement: first reports of dog mortalities associated with neurotoxic filamentous cyanobacterial mats at recreational sites in Lady Bird Lake, Austin, Texas. Data In Brief 33, 106344. https://10.1016/j.dib.2020.106344

*Goessling J, Paul VS, Santiago A, Ashworth MP, Manning SR, Lopez M. 2020. Biosilica slab photonic crystals as an alternative to cleanroom fabrication? Faraday Discuss. https://doi.org/10.1039/D0FD00031K *invited manuscript

Rasheed R, Saadaoui I, Bounnit T, Cherif M, Al Jabri H, Al Ghazal G, Manning SR. 2020. Sustainable food production and nutraceutical applications from Qatar desert Chlorella sp. (Chlorophyceae). Animals 10, 1413. https://doi:10.3390/ani10081413

Saadaoui I, Cherif M, Rasheed R, Bounnit T, Al Jabri H, Sayadi S, Manning SR. 2020. Mychonastes homosphaera (Chlorophyceae): a promising feedstock for high quality feed production in the arid environment. Algal Research 51, 102021. https://doi.org/10.1016/j.algal.2020.102021

Mohammady NGE, El-Khatib KM, El-Galad MI, El-Enin SAA, Attia NK, El-Araby R, El-Diwani G, Manning SR. 2020. Preliminary study on the economic assessment of culturing Nannochloropsis sp. in Egypt for the production of biodiesel and high-value biochemicals. Biomass Conversion and Biorefinery, https://doi.org/10.1007/s13399-020-00878-9

Rakowski CJ, Farrior CE, Manning SR, Leibold MA. 2020. Predator complementarity dampens variability of phytoplankton biomass in a diversity-stability trophic cascade. bioRxiv 851642, https://doi.org/10.1101/851642

Witkowski A, Ashworth MP, Li CH, Sanga I, Yatte D, Górecka E, Franco A, Kusber WH, Klein G, Lange-Bertalot H, Dąbek P, Theriot EC, Manning SR. 2020. Exploring diversity, taxonomy, and phylogeny of diatoms (Bacillariophyta) from marine habitats. Novel taxa with internal costae. Protist, https://doi.org/10.1016/j.protis.2020.125713

2019

*Nobles DR, Manning SR.  2019.  Extraction and Characterization of Lipids from Macroalgae, In: Methods in Molecular Biology, (Ed., V Balan), Springer Publishing, U.S. https://doi.org/10.1007/978-1-4939-9484-7_7, pp 131-140. *invited chapter

Majewska R, Bosak S, Frankovich TA, Ashworth MP, Sullivan MJ, Robinson NJ, Lazo-Wasem EA, Pinou T, Nel R, Manning SR, Van de Vijver B. 2019. Six new epibiotic Proschkinia (Bacillariophyta) species and new insights into the genus phylogeny. Euro J Phycol 54, 609-631. https://doi.org/10.1080/09670262.2019.1628307

Jordan RW, Ashworth MP, Uezato Y, Manning SR. 2019. Polyphyly and homoplasic structures in rhizosolenioid diatom genera. Plant Ecol Evol 152 (2), 142-149. https://doi.org/10.5091/plecevo.2019.1599

Barkia I, Saari N, Manning SR. 2019. Microalgae for high-value products towards human health and nutrition. Mar Drugs 17 (5), 304. https://doi.org/10.3390/md17050304

Gámez T, Benton L, Manning SR. 2019. Observations of two reservoirs during a drought in central Texas, USA: strategies for predicting harmful algal blooms. Ecol Ind 104, 588-593. https://doi.org/10.1016/j.ecolind.2019.05.022

2018

Sabir J, Theriot E, Manning SR, Al-Malki AL, Khiyami MA, Al-Ghamdi AK, Sabir MJ, Romanovicz D, Hajrah NH, El-Omri A, Jansen RK, Ashworth M. 2018. Phylogenetic analysis and a review of the history of the accidental phytoplankter, Phaeodactylum tricornutum Bohlin (Bacillariophyta). PLoS ONE 13 (6):e0196744. https://doi.org/10.1371/journal.pone.0196744

*Roelke D, Manning SR. 2018. Prymnesium parvum, In: Harmful Blooms, a compendium desk reference, (Ed., SE Shumway), Wiley-Blackwell Publishing, U.S. ISBN: 978-1-118-99465-8, 704 pp. *invited chapter

2017

*Manning SR, Nobles DR. 2017. Impact of global warming on water toxicity: cyanotoxins. Current Opinion in Food Science 18, 14-20. https://doi.org/10.1016/j.cofs.2017.09.013 *invited manuscript

2016

Talarski AE, Manning SR, La Claire JW. 2016. Transcriptome analysis of the euryhaline alga, Prymnesium parvum Carter (Haptophyta): effects of salinity on differential gene expression.  Phycologia 55 (1), 33-44. https://doi.org/10.2216/15-74.1

2015

*La Claire JW, Manning SR. 2015. Ichthyotoxins, In: Phycotoxins: Chemistry and Biochemistry, 2nd edition (Eds., L Botana and A Alfonso), Wiley-Blackwell Publishing, U.S. ISBN: 978-1-118-50036-1, 552 pp. *invited chapter

La Claire JW, Manning SR, Talarski AE. 2015. Semi-quantitative assay for polyketide prymnesins isolated from Prymnesium parvum (Haptophyta) cultures. Toxicon 102, 74-80. https://doi.org/10.1016/j.toxicon.2015.06.002

2013

Manning SR, La Claire JW. 2013. Isolation of polyketide toxins from Prymnesium parvum Carter (Haptophyta) and their detection by LC/MS metabolic fingerprint analysis. Anal Biochem 442 (2), 189-195. https://doi.org/10.1016/j.ab.2013.07.034

2012

Jones J, Manning SR, Montoya M, Keller K, Poenie M. 2012. Extraction of algal lipids and their analysis by HPLC and mass spectrometry. J Am Oil Chem Soc 89 (8), 1371-1381. https://doi.org/10.1007/s11746‐012‐2044‐8

2010

Manning SR, La Claire JW. 2010. Multiplex PCR methods for the species-specific detection and quantification of Prymnesium parvum (Haptophyta). J Appl Phycol 22 (1), 587-597. https://doi.org/10.1007/s10811-009-9498-6

*Manning SR, La Claire JW. 2010. Prymnesins: toxic metabolites of the golden alga, Prymnesium parvum Carter (Haptophyta). Mar Drugs 8 (3), 678-704. https://doi.org/10.3390/md8030678 *invited review